C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16273
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159409 Gm16273-001 ENSMUSG00000089962 10090 + 5:66356918-66357185 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLungPlacentaENSMUST00000159409
Transcript ID Bladder Brain Heart Lung Placenta
ENSMUST00000159409 0.466±0.00 0.092±0.01 0.402±0.00 0.617±0.00 0.280±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038T CIL_00038T_0002 CGP 5:66259912-66618828
CIL_00038S CIL_00038S_0002 CGP 5:66298861-66687231

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367399 CRB1-005 protein_coding Homo_sapiens 1e-26 126
ENST00000367400 CRB1-004 protein_coding Homo_sapiens 2e-26 126
ENST00000475659 CRB1-006 retained_intron Homo_sapiens 9e-27 126
ENST00000484075 CRB1-001 nonsense_mediated_decay Homo_sapiens 2e-26 126
ENST00000535699 CRB1-201 protein_coding Homo_sapiens 2e-26 126
ENST00000538660 CRB1-202 protein_coding Homo_sapiens 1e-26 126

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