C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | non-SMC element 4 homolog A (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000369017  |
NSMCE4A-007 |
ENSG00000107672 |
9606 | - |
10:121961757-121975194  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00095T | CIL_00095T_0001 | VISTA | 10:121499915-122101503 |
| CIL_0001BD | CIL_0001BD_0001 | CGP | 10:121740421-121975217 |
| CIL_00047F | CIL_00047F_0002 | CGP | 10:121957088-122254545 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000781 | IEA | chromosome, telomeric region |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0006281 | IEA | DNA repair |
| GO:0006310 | IEA | DNA recombination |
| GO:0030915 | IDA | Smc5-Smc6 complex |
| GO:2001022 | IMP | positive regulation of response to DNA damage stimulus |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000160289
|
Nsmce4a-001 | protein_coding | Mus_musculus | 0 | 1003 |
|
ENSMUST00000161076
|
Nsmce4a-003 | nonsense_mediated_decay | Mus_musculus | 0 | 555 |
|
ENSMUST00000159694
|
Nsmce4a-006 | protein_coding | Mus_musculus | 0 | 553 |
|
ENSMUST00000034431
|
Tmem170-201 | protein_coding | Mus_musculus | 0.00000004 | 64 |
|
ENSMUST00000173269
|
Neu1-002 | retained_intron | Mus_musculus | 0.000002 | 58 |
