C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trophoblast glycoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369750 TPBG-001 ENSG00000146242 9606 + 6:82363631-82370828 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000369750
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000369750 0.355±0.00 0.064±0.00 0.356±0.18 0.260±0.22 0.059±0.00 0.366±0.00 0.696±0.00 0.271±0.00 0.149±0.01 0.111±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GF CIL_0006GF_0001 CGP 6:82169983-82370828
CIL_0006GG CIL_0006GG_0001 CGP 6:82363206-83065841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005887 TAS integral component of plasma membrane
GO:0007155 NAS cell adhesion
GO:0009986 IDA cell surface

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098500 Tpbg-001 protein_coding Mus_musculus 0 1330
ENSMUST00000006559 Tpbg-002 protein_coding Mus_musculus 0 1312

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