C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006GF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000005700-ENSG00000146242 CGP 9606 6:82169983-82370828
GeneTranscriptPositionBiotype
ENSG00000005700 (IBTK)
inhibitor of Bruton agammaglobulinemia tyrosine kinase 		ENST00000306270 (IBTK-001) 82169983-82247754 protein_coding
ENST00000369751 (IBTK-004) 82191331-82247754 retained_intron
ENST00000445419 (IBTK-008) 82170239-82205929 retained_intron
ENST00000471036 (IBTK-003) 82171508-82191854 nonsense_mediated_decay
ENST00000503400 (IBTK-005) 82170743-82247671 nonsense_mediated_decay
ENST00000503631 (IBTK-006) 82171403-82240565 protein_coding
ENST00000505222 (IBTK-002) 82169986-82240565 retained_intron
ENST00000508381 (IBTK-010) 82170236-82173578 retained_intron
ENST00000510291 (IBTK-007) 82171412-82240565 protein_coding
ENST00000610980 (IBTK-201) 82170239-82247754 protein_coding
ENSG00000146242 (TPBG)
trophoblast glycoprotein 		ENST00000369750 (TPBG-001) 82363631-82370828 protein_coding
ENST00000535040 (TPBG-201) 82363206-82367417 protein_coding
ENST00000543496 (TPBG-202) 82364244-82367417 protein_coding
ENSG00000220537 (RP3-492P14.2)
 ENST00000401636 (RP3-492P14.2-001) 82263996-82264974 processed_pseudogene
ENSG00000223044 (RNU6-130P)
RNA, U6 small nuclear 130, pseudogene 		ENST00000411112 (RNU6-130P-201) 82210338-82210440 snRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006GF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035941-ENSMUSG00000035274 CGP 10090 9:85687360-85847040
GeneTranscriptPositionBiotype
ENSMUSG00000035274 (Tpbg)
trophoblast glycoprotein 		ENSMUST00000006559 (Tpbg-002) 85842380-85847040 protein_coding
ENSMUST00000098500 (Tpbg-001) 85842865-85847040 protein_coding
ENSMUST00000185559 (Tpbg-003) 85843361-85843925 processed_transcript
ENSMUSG00000035941 (Ibtk)
inhibitor of Bruton agammaglobulinemia tyrosine kinase 		ENSMUST00000039213 (Ibtk-001) 85687360-85749334 protein_coding
ENSMUST00000185353 (Ibtk-005) 85720183-85749314 retained_intron
ENSMUST00000186322 (Ibtk-002) 85687557-85720823 retained_intron
ENSMUST00000186447 (Ibtk-006) 85728293-85731235 retained_intron
ENSMUST00000187521 (Ibtk-003) 85687542-85749334 nonsense_mediated_decay
ENSMUST00000188768 (Ibtk-007) 85708168-85718538 retained_intron
ENSMUSG00000056031 (9330154J02Rik)
RIKEN cDNA 9330154J02 gene 		ENSMUST00000069896 (9330154J02Rik-201) 85820241-85843285 processed_transcript
ENSMUST00000185960 (9330154J02Rik-003) 85820302-85844323 antisense
ENSMUST00000187891 (9330154J02Rik-002) 85821526-85843284 retained_intron
ENSMUST00000189191 (9330154J02Rik-001) 85820241-85844131 antisense
ENSMUSG00000099980 (RP23-58N8.4)
predicted gene 5619 		ENSMUST00000071172 (RP23-58N8.4-001) 85781868-85782627 processed_pseudogene
ENSMUSG00000100019 (RP23-58N8.5)
predicted gene, 18766 		ENSMUST00000189811 (RP23-58N8.5-001) 85789764-85790571 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GF_0001ENSG00000005700ENST00000306270ENST00000369751ENST00000445419ENST00000471036ENST00000503400ENST00000503631ENST00000505222ENST00000508381ENST00000510291ENST00000610980ENSG00000146242ENST00000369750ENST00000535040ENST00000543496ENSG00000220537ENST00000401636ENSG00000223044ENST00000411112CIL_0006GF_0002ENSMUSG00000035274ENSMUST00000006559ENSMUST00000098500ENSMUST00000185559ENSMUSG00000035941ENSMUST00000039213ENSMUST00000185353ENSMUST00000186322ENSMUST00000186447ENSMUST00000187521ENSMUST00000188768ENSMUSG00000056031ENSMUST00000069896ENSMUST00000185960ENSMUST00000187891ENSMUST00000189191ENSMUSG00000099980ENSMUST00000071172ENSMUSG00000100019ENSMUST00000189811
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GF_0001ENSG00000005700ENST00000306270ENST00000369751ENST00000445419ENST00000503400ENST00000503631ENST00000508381ENST00000510291ENST00000610980ENSG00000146242ENST00000369750ENST00000535040ENST00000543496ENSG00000220537ENST00000401636ENSG00000223044ENST00000411112CIL_0006GF_0002ENSMUSG00000035274ENSMUST00000006559ENSMUST00000098500ENSMUSG00000035941ENSMUST00000039213ENSMUST00000185353ENSMUST00000186322ENSMUST00000187521ENSMUSG00000056031ENSMUST00000069896ENSMUST00000187891ENSMUSG00000099980ENSMUST00000071172ENSMUSG00000100019ENSMUST00000189811
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005700 ENST00000306270 1.789±0.00 1.744±0.00 0.342±0.00 4.206±0.00 2.766±1.47 N/A 2.102±0.68 1.440±0.00 1.092±0.00 2.977±0.97 1.255±0.00 4.206±1.73 1.958±0.32 1.093±0.03
ENST00000369751 N/A N/A N/A N/A 2.975±0.00 3.110±0.00 0.910±0.00 N/A N/A 1.984±0.00 N/A 1.648±0.00 N/A N/A
ENST00000445419 N/A 1.100±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.409±0.00 N/A N/A N/A
ENST00000503631 N/A N/A 0.569±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.844±0.00 N/A N/A
ENST00000505222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508381 N/A 2.018±0.00 N/A N/A N/A N/A N/A N/A N/A 2.291±0.00 N/A N/A N/A 1.939±0.00
ENST00000510291 1.239±0.00 N/A 1.805±0.00 3.113±0.16 2.122±0.46 3.418±0.00 1.390±0.03 3.717±0.00 3.692±1.07 N/A 1.195±0.28 1.490±0.00 N/A 1.177±0.00
ENST00000610980 1.333±0.00 1.750±0.00 0.472±0.00 2.442±0.00 1.400±0.00 2.852±0.63 1.624±0.87 3.547±0.19 2.512±0.00 0.916±0.00 1.416±0.55 1.798±0.00 0.878±0.39 1.424±0.22
ENSG00000146242 ENST00000369750 0.355±0.00 N/A N/A 0.064±0.00 0.356±0.18 0.260±0.22 0.059±0.00 0.366±0.00 0.696±0.00 0.271±0.00 N/A 0.149±0.01 N/A 0.111±0.00
ENST00000535040 N/A 0.448±0.00 N/A 0.208±0.00 N/A N/A N/A N/A N/A N/A N/A 0.949±0.36 4.503±3.27 1.264±0.69
ENST00000543496 3.961±0.00 2.764±0.00 N/A 1.171±0.13 2.203±0.62 2.766±2.24 1.336±0.00 2.787±2.48 1.752±1.48 3.794±0.00 0.587±0.29 1.917±0.85 8.408±5.28 2.433±1.99
ENSG00000220537 ENST00000401636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.03
ENSG00000223044 ENST00000411112 N/A N/A N/A 0.209±0.00 0.205±0.00 N/A N/A N/A N/A N/A 1.325±0.00 N/A N/A 0.971±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035274 ENSMUST00000006559 1.265±0.43 0.309±0.00 1.120±0.06 1.115±0.55 1.308±0.35 0.456±0.02 0.127±0.00 0.274±0.11 0.019±0.02 0.719±0.00 0.054±0.00 1.328±0.96 0.426±0.00 0.239±0.03
ENSMUST00000098500 1.943±1.76 1.272±0.41 5.445±1.08 4.653±2.42 4.853±2.36 2.636±1.16 0.115±0.00 0.500±0.27 0.113±0.09 1.110±0.27 0.052±0.02 6.077±3.44 0.366±0.33 0.128±0.10
ENSMUST00000185559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035941 ENSMUST00000039213 2.650±1.44 3.050±1.44 7.709±1.32 3.903±1.53 2.543±1.13 3.663±1.01 3.286±0.38 2.941±0.67 4.806±1.41 3.580±0.64 9.374±1.35 5.790±4.80 4.851±1.63 2.053±0.18
ENSMUST00000185353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.295±0.00 N/A N/A
ENSMUST00000186322 N/A N/A N/A 1.068±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187521 1.153±0.57 3.629±1.34 1.937±0.00 1.262±0.18 1.380±0.62 2.165±1.18 0.614±0.00 1.167±0.28 1.472±0.62 1.376±0.00 2.683±0.58 6.297±3.31 2.620±1.20 0.908±0.00
ENSMUST00000188768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000056031 ENSMUST00000069896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A
ENSMUST00000185960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00
ENSMUST00000189191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099980 ENSMUST00000071172 0.053±0.01 0.173±0.00 0.030±0.01 0.048±0.01 0.144±0.00 0.125±0.04 N/A 0.124±0.07 0.044±0.02 0.191±0.00 N/A 0.178±0.01 0.054±0.03 0.043±0.00
ENSMUSG00000100019 ENSMUST00000189811 N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.02

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