C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 86
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189018 Ccdc86-003 ENSMUSG00000024732 10090 - 19:10945507-10949251 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartLiverLungOvaryPlacentaTestisENSMUST00000189018
Transcript ID Adrenal Brain Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000189018 0.908±0.10 0.290±0.05 0.506±0.11 0.135±0.00 0.271±0.07 0.524±0.00 0.555±0.13 0.392±0.00 0.372±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329335 RP1L1-002 processed_transcript Homo_sapiens 0.0000000000005 81
ENST00000336111 OGFOD1-002 nonsense_mediated_decay Homo_sapiens 3e-16 92
ENST00000353231 CLEC7A-001 protein_coding Homo_sapiens 0.00000000003 75
ENST00000369940 IRAK1BP1-001 protein_coding Homo_sapiens 0.00000001 68
ENST00000382040 RSAD2-001 protein_coding Homo_sapiens 0.000005 58
ENST00000392869 GTDC1-001 protein_coding Homo_sapiens 0.00000002 68
ENST00000397802 POLR3D-001 protein_coding Homo_sapiens 0.000000001 71
ENST00000420643 MAPKAP1-005 protein_coding Homo_sapiens 0.00000000001 75
ENST00000424445 PPIL6-201 protein_coding Homo_sapiens 0.00000000006 75
ENST00000468856 RASGRP3-005 retained_intron Homo_sapiens 0.0000000000003 82
ENST00000469222 SAG-006 retained_intron Homo_sapiens 0.0000000009 71
ENST00000482731 RASGRP3-020 processed_transcript Homo_sapiens 0.00000000000005 82
ENST00000504295 COPB2-003 retained_intron Homo_sapiens 0.0000001 64
ENST00000521072 PPIL6-001 protein_coding Homo_sapiens 0.00000000006 75
ENST00000534609 CLEC7A-005 retained_intron Homo_sapiens 0.00000000005 75
ENST00000536445 POLE-014 retained_intron Homo_sapiens 0.000000002 69
ENST00000543026 DDX11-014 retained_intron Homo_sapiens 0.00000000003 75
ENST00000550065 SUOX-008 nonsense_mediated_decay Homo_sapiens 0.000000002 69
ENST00000566157 OGFOD1-001 protein_coding Homo_sapiens 6e-16 92
ENST00000573605 FBXW10-006 processed_transcript Homo_sapiens 0.0000000000006 79
ENST00000576164 MYH11-009 retained_intron Homo_sapiens 0.000000000002 81
ENST00000587604 DNMT1-023 retained_intron Homo_sapiens 0.000000001 68
ENST00000603918 BNIP3P28-001 processed_pseudogene Homo_sapiens 0.000000000005 77

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