C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 6030458C11 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057256 6030458C11Rik-201 ENSMUSG00000022195 10090 - 15:12808177-12824657 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057256
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057256 3.590±1.68 8.378±2.26 3.788±1.79 5.201±1.42 4.408±0.85 6.201±0.72 3.435±0.51 3.685±1.02 9.543±6.51 4.361±0.63 6.250±0.40 8.645±3.26 6.730±3.57 1.692±0.74

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325366 C5orf22-001 protein_coding Homo_sapiens 0 1162
ENST00000336111 OGFOD1-002 nonsense_mediated_decay Homo_sapiens 0.00000000000006 84
ENST00000353231 CLEC7A-001 protein_coding Homo_sapiens 0.0000000001 73
ENST00000369940 IRAK1BP1-001 protein_coding Homo_sapiens 0.00000001 68
ENST00000374987 APEX2-001 protein_coding Homo_sapiens 0.0000004 62
ENST00000382040 RSAD2-001 protein_coding Homo_sapiens 0.0002 53
ENST00000397802 POLR3D-001 protein_coding Homo_sapiens 0.000000001 71
ENST00000415808 PMCHL2-004 processed_transcript Homo_sapiens 0.00000002 66
ENST00000418902 PMCHL1-001 processed_transcript Homo_sapiens 0.0000000003 71
ENST00000420643 MAPKAP1-005 protein_coding Homo_sapiens 0.000000002 68
ENST00000424445 PPIL6-201 protein_coding Homo_sapiens 0.0000000007 71
ENST00000450213 PMCHL2-002 processed_transcript Homo_sapiens 0.00000002 66
ENST00000468856 RASGRP3-005 retained_intron Homo_sapiens 0.0000000002 73
ENST00000469222 SAG-006 retained_intron Homo_sapiens 0.00000001 68
ENST00000482731 RASGRP3-020 processed_transcript Homo_sapiens 0.00000000003 73
ENST00000490967 SELM-003 retained_intron Homo_sapiens 0.0000000004 71
ENST00000504295 COPB2-003 retained_intron Homo_sapiens 0.0000004 62
ENST00000504464 C5orf22-009 nonsense_mediated_decay Homo_sapiens 0 372
ENST00000504866 C5orf22-004 processed_transcript Homo_sapiens 0 239
ENST00000510530 C5orf22-008 retained_intron Homo_sapiens 0 514
ENST00000510659 C5orf22-002 nonsense_mediated_decay Homo_sapiens 0 604
ENST00000513967 C5orf22-003 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000521072 PPIL6-001 protein_coding Homo_sapiens 0.0000000007 71
ENST00000534609 CLEC7A-005 retained_intron Homo_sapiens 0.0000000002 73
ENST00000536445 POLE-014 retained_intron Homo_sapiens 0.0000009 60
ENST00000543026 DDX11-014 retained_intron Homo_sapiens 0.000000005 68
ENST00000550065 SUOX-008 nonsense_mediated_decay Homo_sapiens 0.000000006 68
ENST00000566157 OGFOD1-001 protein_coding Homo_sapiens 0.0000000000001 84
ENST00000603918 BNIP3P28-001 processed_pseudogene Homo_sapiens 0.0000000002 71
ENST00000618044 AC145141.1-004 processed_transcript Homo_sapiens 0.00000002 66
ENST00000619209 AC145141.1-002 processed_transcript Homo_sapiens 0.00000002 66

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