C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial tRNA translation optimization 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370300 MTO1-003 ENSG00000135297 9606 + 6:73461765-73501452 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartLiverOvaryPlacentaENST00000370300
Transcript ID Adipose Adrenal Breast Heart Liver Ovary Placenta
ENST00000370300 1.049±0.00 1.783±0.00 1.234±0.00 0.997±0.00 1.652±0.00 1.986±0.00 0.984±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0001 CGP 6:73461578-73523797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0008033 IEA tRNA processing
GO:0044822 IDA poly(A) RNA binding
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034896 Mto1-001 protein_coding Mus_musculus 0 1170
ENSMUST00000148238 Mto1-007 nonsense_mediated_decay Mus_musculus 0 863
ENSMUST00000150850 Mto1-002 retained_intron Mus_musculus 0 414

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