C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial tRNA translation optimization 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370305 MTO1-007 ENSG00000135297 9606 + 6:73461746-73500923 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370305
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370305 2.198±0.00 2.685±0.00 2.972±0.00 1.785±0.00 3.287±0.00 2.118±0.00 3.890±0.00 2.174±0.00 2.184±0.55 2.103±1.16 2.013±0.47 0.861±0.00 10.518±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0001 CGP 6:73461578-73523797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0008033 IEA tRNA processing
GO:0044822 IDA poly(A) RNA binding
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034896 Mto1-001 protein_coding Mus_musculus 0 1020
ENSMUST00000148238 Mto1-007 nonsense_mediated_decay Mus_musculus 0 863
ENSMUST00000150850 Mto1-002 retained_intron Mus_musculus 0 265

Loading