C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanylate binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370481 GBP3-008 ENSG00000117226 9606 - 1:89006666-89022882 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartLiverLungOvaryPlacentaTestisENST00000370481
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000370481 0.418±0.00 1.007±0.00 0.635±0.00 2.952±0.00 1.882±0.80 0.313±0.03 0.949±0.35 12.616±0.00 3.588±1.41 2.016±0.27 0.172±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000033 CIL_000033_0003 CGP 1:89006666-89065360

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0006184 IEA GTP catabolic process
GO:0016020 IEA membrane
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165774 Gbp2-001 protein_coding Mus_musculus 0 841
ENSMUST00000169572 Gbp2-002 nonsense_mediated_decay Mus_musculus 0 348
ENSMUST00000045097 Gbp7-201 protein_coding Mus_musculus 0 265
ENSMUST00000171263 Gbp7-202 protein_coding Mus_musculus 0 265

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