C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain GRB2-like (endophilin) interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371037 SGIP1-001 ENSG00000118473 9606 + 1:66534282-66748299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverOvaryPlacentaTestisENST00000371037
Transcript ID Breast Heart Liver Ovary Placenta Testis
ENST00000371037 0.257±0.19 0.145±0.00 0.085±0.00 0.109±0.00 0.021±0.00 0.171±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NS CIL_0002NS_0001 CGP 1:65792514-66748299
CIL_000262 CIL_000262_0001 CGP 1:66533383-66778787

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002021 ISS response to dietary excess
GO:0005515 IPI:IEA protein binding
GO:0005543 ISS phospholipid binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005905 IDA coated pit
GO:0006886 IEA intracellular protein transport
GO:0006897 IEA endocytosis
GO:0008017 ISS microtubule binding
GO:0015631 IEA tubulin binding
GO:0016192 IEA vesicle-mediated transport
GO:0017124 IPI SH3 domain binding
GO:0030122 ISS AP-2 adaptor complex
GO:0030131 IEA clathrin adaptor complex
GO:0030136 ISS clathrin-coated vesicle
GO:0048260 ISS positive regulation of receptor-mediated endocytosis
GO:0097320 IEA membrane tubulation
GO:2000253 ISS positive regulation of feeding behavior
GO:2000507 ISS positive regulation of energy homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106882 Sgip1-007 protein_coding Mus_musculus 0 4196
ENSMUST00000066824 Sgip1-001 protein_coding Mus_musculus 0 2370
ENSMUST00000080728 Sgip1-004 protein_coding Mus_musculus 0 2244
ENSMUST00000072481 Sgip1-006 protein_coding Mus_musculus 0 1917
ENSMUST00000149547 Sgip1-005 protein_coding Mus_musculus 0 1629
ENSMUST00000140676 Sgip1-015 processed_transcript Mus_musculus 0 780
ENSMUST00000183855 Sgip1-002 nonsense_mediated_decay Mus_musculus 0 736
ENSMUST00000142430 Sgip1-003 processed_transcript Mus_musculus 0 736
ENSMUST00000097948 Sgip1-012 protein_coding Mus_musculus 0 736
ENSMUST00000131431 Sgip1-014 processed_transcript Mus_musculus 0 503
ENSMUST00000141624 Sgip1-013 processed_transcript Mus_musculus 0 348
ENSMUST00000140289 Sgip1-010 processed_transcript Mus_musculus 0 292
ENSMUST00000137592 Sgip1-009 processed_transcript Mus_musculus 0 265
ENSMUST00000136164 Sgip1-008 processed_transcript Mus_musculus 0 263
ENSMUST00000156596 Sgip1-011 protein_coding Mus_musculus 0 263
ENSDART00000051271 fcho2-201 protein_coding Danio_rerio 0.000000000008 79
ENSDART00000139673 fcho2-001 protein_coding Danio_rerio 0.000000000008 79
ENSDART00000141218 fcho2-002 protein_coding Danio_rerio 0.000000000008 79

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