C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain GRB2-like (endophilin) interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183855 Sgip1-002 ENSMUSG00000028524 10090 + 4:102760465-102919120 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverTestisENSMUST00000183855
Transcript ID Liver Testis
ENSMUST00000183855 0.127±0.00 2.582±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NS CIL_0002NS_0002 CGP 4:102087543-102973628
CIL_000262 CIL_000262_0002 CGP 4:102741297-103005594

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002021 ISS response to dietary excess
GO:0005515 IPI protein binding
GO:0005543 IDA phospholipid binding
GO:0005737 ISS cytoplasm
GO:0005886 IDA plasma membrane
GO:0006897 IEA endocytosis
GO:0008017 IDA microtubule binding
GO:0015631 IPI tubulin binding
GO:0030122 IDA AP-2 adaptor complex
GO:0030136 IDA clathrin-coated vesicle
GO:0048260 IMP positive regulation of receptor-mediated endocytosis
GO:0097320 IDA membrane tubulation
GO:2000253 ISS positive regulation of feeding behavior
GO:2000507 ISS positive regulation of energy homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237247 SGIP1-002 protein_coding Homo_sapiens 0 379
ENST00000371037 SGIP1-001 protein_coding Homo_sapiens 0 736
ENST00000371039 SGIP1-003 protein_coding Homo_sapiens 0 647
ENST00000424320 SGIP1-006 protein_coding Homo_sapiens 0 1013
ENST00000468286 SGIP1-007 processed_transcript Homo_sapiens 0 560
ENST00000480548 SGIP1-013 processed_transcript Homo_sapiens 0 381
ENST00000483060 SGIP1-010 processed_transcript Homo_sapiens 0 604
ENST00000484988 SGIP1-009 processed_transcript Homo_sapiens 3e-20 102
ENST00000493564 SGIP1-005 processed_transcript Homo_sapiens 3e-35 152
ENST00000497055 SGIP1-008 processed_transcript Homo_sapiens 0 254

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