C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain GRB2-like (endophilin) interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371039 SGIP1-003 ENSG00000118473 9606 + 1:66533592-66745085 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371039
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371039 0.234±0.00 2.723±0.00 0.156±0.00 0.528±0.00 0.272±0.00 0.241±0.00 0.038±0.00 0.818±0.00 0.138±0.00 0.232±0.04 0.087±0.03 0.653±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NS CIL_0002NS_0001 CGP 1:65792514-66748299
CIL_000262 CIL_000262_0001 CGP 1:66533383-66778787

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002021 ISS response to dietary excess
GO:0005515 IPI:IEA protein binding
GO:0005543 ISS phospholipid binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005905 IDA coated pit
GO:0006886 IEA intracellular protein transport
GO:0006897 IEA endocytosis
GO:0008017 ISS microtubule binding
GO:0016192 IEA vesicle-mediated transport
GO:0017124 IPI SH3 domain binding
GO:0030122 ISS AP-2 adaptor complex
GO:0030131 IEA clathrin adaptor complex
GO:0030136 ISS clathrin-coated vesicle
GO:0048260 ISS positive regulation of receptor-mediated endocytosis
GO:2000253 ISS positive regulation of feeding behavior
GO:2000507 ISS positive regulation of energy homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106882 Sgip1-007 protein_coding Mus_musculus 0 1919
ENSMUST00000066824 Sgip1-001 protein_coding Mus_musculus 0 1919
ENSMUST00000072481 Sgip1-006 protein_coding Mus_musculus 0 1917
ENSMUST00000080728 Sgip1-004 protein_coding Mus_musculus 0 1890
ENSMUST00000149547 Sgip1-005 protein_coding Mus_musculus 0 1526
ENSMUST00000140676 Sgip1-015 processed_transcript Mus_musculus 0 780
ENSMUST00000183855 Sgip1-002 nonsense_mediated_decay Mus_musculus 0 647
ENSMUST00000156596 Sgip1-011 protein_coding Mus_musculus 0 459
ENSMUST00000142430 Sgip1-003 processed_transcript Mus_musculus 0 379
ENSMUST00000097948 Sgip1-012 protein_coding Mus_musculus 0 379
ENSMUST00000141624 Sgip1-013 processed_transcript Mus_musculus 0 353
ENSMUST00000136164 Sgip1-008 processed_transcript Mus_musculus 0 289
ENSMUST00000137592 Sgip1-009 processed_transcript Mus_musculus 0 289
ENSMUST00000140289 Sgip1-010 processed_transcript Mus_musculus 4.99997e-41 174
ENSMUST00000131431 Sgip1-014 processed_transcript Mus_musculus 3e-39 169
ENSDART00000051271 fcho2-201 protein_coding Danio_rerio 0.000000000004 79
ENSDART00000139673 fcho2-001 protein_coding Danio_rerio 0.000000000004 79
ENSDART00000141218 fcho2-002 protein_coding Danio_rerio 0.000000000004 79

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