C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372487 RBM41-001 ENSG00000089682 9606 - X:107064420-107118800 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000372487
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000372487 0.351±0.00 0.519±0.00 0.618±0.00 1.381±0.00 0.662±0.00 0.359±0.00 0.684±0.00 0.418±0.12 0.393±0.00 0.615±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000173 CIL_000173_0002 CGP X:106900164-107118823
CIL_0006AD CIL_0006AD_0001 CGP X:107064420-107206433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033810 Rbm41-003 protein_coding Mus_musculus 0 1568
ENSMUST00000113007 Rbm41-001 protein_coding Mus_musculus 0 1528
ENSMUST00000087400 Rbm41-201 protein_coding Mus_musculus 0 1454
ENSMUST00000138635 Rbm41-005 retained_intron Mus_musculus 0 1088
ENSMUST00000135126 Rbm41-006 processed_transcript Mus_musculus 0 865
ENSMUST00000113011 Rbm41-002 protein_coding Mus_musculus 0 835
ENSMUST00000148703 Rbm41-004 retained_intron Mus_musculus 0 701
ENSMUST00000167316 Zfp655-202 protein_coding Mus_musculus 0.00005 55

Loading