C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006AD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000089682-ENSG00000198088 CGP 9606 X:107064420-107206433
GeneTranscriptPositionBiotype
ENSG00000089682 (RBM41)
RNA binding motif protein 41 		ENST00000372479 (RBM41-002) 107067138-107118804 protein_coding
ENST00000372487 (RBM41-001) 107064420-107118800 protein_coding
ENST00000434854 (RBM41-008) 107069310-107116766 protein_coding
ENST00000471079 (RBM41-004) 107114300-107116766 processed_transcript
ENST00000474499 (RBM41-007) 107066645-107069277 processed_transcript
ENST00000475556 (RBM41-006) 107088436-107115454 processed_transcript
ENST00000485676 (RBM41-005) 107088526-107116768 processed_transcript
ENST00000495517 (RBM41-003) 107066300-107118823 nonsense_mediated_decay
ENSG00000198088 (NUP62CL)
nucleoporin 62kDa C-terminal like 		ENST00000372466 (NUP62CL-001) 107123427-107206433 protein_coding
ENST00000421752 (NUP62CL-003) 107153292-107206433 protein_coding
ENST00000432145 (NUP62CL-004) 107124148-107154234 protein_coding
ENST00000484614 (NUP62CL-002) 107123472-107206433 nonsense_mediated_decay
ENSG00000213569 (RP13-383K5.4)
 ENST00000399148 (RP13-383K5.4-001) 107131659-107132269 processed_pseudogene
CIL_0006AD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031433-ENSMUSG00000072944 CGP 10090 X:139889511-140062712
GeneTranscriptPositionBiotype
ENSMUSG00000031433 (Rbm41)
RNA binding motif protein 41 		ENSMUST00000033810 (Rbm41-003) 139944236-139998551 protein_coding
ENSMUST00000087400 (Rbm41-201) 139889511-139998595 protein_coding
ENSMUST00000113007 (Rbm41-001) 139943405-139998542 protein_coding
ENSMUST00000113011 (Rbm41-002) 139943373-139998557 protein_coding
ENSMUST00000135126 (Rbm41-006) 139968365-139998536 processed_transcript
ENSMUST00000138635 (Rbm41-005) 139967581-139994082 retained_intron
ENSMUST00000148703 (Rbm41-004) 139992357-139998566 retained_intron
ENSMUSG00000072944 (Nup62cl)
nucleoporin 62 C-terminal like 		ENSMUST00000101212 (Nup62cl-001) 140006805-140062568 protein_coding
ENSMUST00000124075 (Nup62cl-003) 140034790-140062551 protein_coding
ENSMUST00000125678 (Nup62cl-005) 140028209-140062580 protein_coding
ENSMUST00000133780 (Nup62cl-002) 140027609-140062712 protein_coding
ENSMUST00000154385 (Nup62cl-004) 140022062-140062293 protein_coding
ENSMUSG00000081374 (Gm15011)
predicted gene 15011 		ENSMUST00000117724 (Gm15011-001) 139892934-139894413 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AD_0001ENSG00000089682ENST00000372479ENST00000372487ENST00000434854ENST00000471079ENST00000474499ENST00000475556ENST00000485676ENST00000495517ENSG00000198088ENST00000372466ENST00000421752ENST00000432145ENST00000484614ENSG00000213569ENST00000399148CIL_0006AD_0002ENSMUSG00000031433ENSMUST00000033810ENSMUST00000087400ENSMUST00000113007ENSMUST00000113011ENSMUST00000135126ENSMUST00000138635ENSMUST00000148703ENSMUSG00000072944ENSMUST00000101212ENSMUST00000124075ENSMUST00000125678ENSMUST00000133780ENSMUST00000154385ENSMUSG00000081374ENSMUST00000117724
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AD_0001ENSG00000089682ENST00000372479ENST00000372487ENST00000471079ENST00000495517ENSG00000198088ENST00000372466ENST00000421752ENST00000432145ENST00000484614ENSG00000213569ENST00000399148CIL_0006AD_0002ENSMUSG00000031433ENSMUST00000033810ENSMUST00000087400ENSMUST00000113007ENSMUST00000113011ENSMUST00000135126ENSMUST00000138635ENSMUST00000148703ENSMUSG00000072944ENSMUST00000101212ENSMUST00000124075ENSMUST00000125678ENSMUST00000133780ENSMUST00000154385ENSMUSG00000081374ENSMUST00000117724
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089682 ENST00000372479 N/A 0.458±0.00 N/A 0.453±0.00 0.870±0.35 N/A N/A 1.177±0.00 1.070±0.29 0.626±0.00 N/A 0.384±0.00 0.291±0.15 N/A
ENST00000372487 0.351±0.00 N/A N/A 0.519±0.00 0.618±0.00 1.381±0.00 0.662±0.00 N/A 0.359±0.00 0.684±0.00 N/A 0.418±0.12 0.393±0.00 0.615±0.00
ENST00000434854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471079 N/A N/A N/A N/A N/A N/A 0.573±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000474499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495517 N/A N/A N/A N/A N/A 0.490±0.00 N/A N/A N/A N/A N/A 1.328±1.16 0.094±0.00 N/A
ENSG00000198088 ENST00000372466 0.015±0.00 N/A N/A 0.054±0.00 N/A 0.148±0.00 0.211±0.00 0.684±0.41 N/A N/A N/A 1.619±1.35 0.109±0.08 0.824±0.00
ENST00000421752 0.104±0.00 N/A N/A N/A N/A N/A N/A 0.489±0.00 N/A N/A N/A N/A 0.077±0.00 N/A
ENST00000432145 N/A N/A 1.907±0.00 N/A 0.046±0.00 0.810±0.00 N/A 0.474±0.00 N/A 0.253±0.00 N/A 2.261±1.28 0.077±0.02 2.258±0.00
ENST00000484614 N/A 0.101±0.00 N/A 0.107±0.00 0.192±0.06 0.253±0.19 0.060±0.00 N/A 0.234±0.03 0.565±0.00 N/A 0.122±0.00 0.050±0.00 N/A
ENSG00000213569 ENST00000399148 0.017±0.00 0.017±0.00 N/A N/A 0.099±0.00 0.184±0.00 N/A N/A N/A N/A 0.093±0.00 N/A N/A 0.106±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031433 ENSMUST00000033810 N/A 0.232±0.04 N/A N/A 0.212±0.09 0.467±0.00 0.111±0.01 0.165±0.00 0.107±0.06 0.328±0.00 N/A 0.728±0.00 N/A 0.079±0.00
ENSMUST00000087400 N/A N/A N/A N/A N/A N/A 0.110±0.03 0.063±0.00 N/A N/A N/A 0.212±0.08 N/A 0.036±0.00
ENSMUST00000113007 N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.04 N/A 0.122±0.00 0.180±0.00 N/A 0.045±0.00
ENSMUST00000113011 N/A 0.224±0.03 N/A 0.461±0.00 0.363±0.08 0.227±0.16 0.309±0.00 0.294±0.06 0.207±0.04 0.559±0.09 0.270±0.12 0.302±0.14 0.353±0.00 0.054±0.03
ENSMUST00000135126 N/A 0.391±0.00 N/A N/A N/A 0.036±0.00 N/A N/A 0.126±0.00 N/A N/A 0.380±0.00 N/A 0.169±0.01
ENSMUST00000138635 0.128±0.00 0.512±0.19 N/A N/A 0.149±0.10 N/A N/A 0.257±0.00 N/A N/A N/A N/A N/A 0.063±0.03
ENSMUST00000148703 N/A N/A N/A N/A N/A N/A N/A 0.136±0.00 0.084±0.02 N/A N/A 0.162±0.01 N/A 0.028±0.00
ENSMUSG00000072944 ENSMUST00000101212 0.118±0.07 1.153±0.43 1.484±0.30 0.150±0.10 0.081±0.06 0.060±0.02 0.047±0.04 0.146±0.07 0.338±0.26 0.175±0.02 0.020±0.00 0.634±0.23 41.205±29.09 3.519±1.06
ENSMUST00000124075 N/A N/A N/A N/A N/A 0.208±0.00 N/A 0.622±0.00 N/A 0.212±0.00 N/A 1.390±0.00 N/A N/A
ENSMUST00000125678 1.778±0.81 8.030±2.02 8.544±0.60 1.046±0.09 0.811±0.38 0.244±0.07 N/A 1.856±1.18 1.825±0.94 1.228±0.73 N/A 7.157±2.76 253.398±34.78 33.527±9.46
ENSMUST00000133780 0.381±0.12 1.281±0.67 N/A 0.534±0.00 0.139±0.05 N/A 0.155±0.04 0.248±0.08 0.321±0.10 0.266±0.11 N/A 1.552±1.07 N/A 3.599±0.98
ENSMUST00000154385 N/A 2.047±0.40 N/A 0.018±0.00 N/A N/A N/A N/A 0.194±0.00 N/A N/A 0.271±0.00 229.230±24.30 1.954±0.75
ENSMUSG00000081374 ENSMUST00000117724 N/A N/A 0.010±0.00 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A

Loading