C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, T
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373198 PTPRT-005 ENSG00000196090 9606 - 20:42072752-43189969 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E5 CIL_0004E5_0001 CGP 20:41402101-43189970
CIL_0004E4 CIL_0004E4_0001 CGP 20:42072752-43464247

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0006470 IEA protein dephosphorylation
GO:0008013 IEA beta-catenin binding
GO:0016020 IEA membrane
GO:0016311 IEA dephosphorylation
GO:0016790 IEA thiolester hydrolase activity
GO:0016791 IEA phosphatase activity
GO:0045294 IEA alpha-catenin binding
GO:0045295 IEA gamma-catenin binding
GO:0045296 IEA cadherin binding
GO:0051393 IEA alpha-actinin binding
GO:0070097 IEA delta-catenin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109443 Ptprt-003 protein_coding Mus_musculus 0 3158
ENSMUST00000109442 Ptprt-002 protein_coding Mus_musculus 0 3114
ENSMUST00000109445 Ptprt-001 protein_coding Mus_musculus 0 2898
ENSMUST00000109441 Ptprt-004 protein_coding Mus_musculus 0 2885
ENSMUST00000153770 Ptprt-006 processed_transcript Mus_musculus 0 424
ENSMUST00000037974 Ptprm-201 protein_coding Mus_musculus 3.99931e-42 180

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