C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038956 Lrrc18-001 ENSMUSG00000041673 10090 + 14:32991382-33015292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000038956
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000038956 0.069±0.00 0.051±0.00 0.040±0.00 0.052±0.00 0.149±0.05 0.102±0.04 0.040±0.01 0.089±0.03 0.023±0.01 0.021±0.01 0.465±0.26 0.093±0.06 14.461±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZL CIL_0008ZL_0002 VISTA 14:32470674-33071522
CIL_0007OS CIL_0007OS_0003 UCNEbase 14:32546905-33068248
CIL_0006H6 CIL_0006H6_0002 CGP 14:32856756-33185508
CIL_0002J0 CIL_0002J0_0003 CGP 14:32959547-33185508
CIL_0006H4 CIL_0006H4_0002 CGP 14:32991382-33369934

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298124 LRRC18-201 protein_coding Homo_sapiens 0 880
ENST00000374160 LRRC18-001 protein_coding Homo_sapiens 0 880

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