C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and tetratricopeptide repeat containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376234 TMTC4-004 ENSG00000125247 9606 - 13:100603927-100674879 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376234
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376234 0.818±0.00 5.947±0.81 1.164±0.37 1.077±0.42 0.355±0.00 1.392±0.19 1.121±0.32 0.377±0.00 1.256±0.31 1.657±1.56 1.100±0.43 2.004±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NV CIL_0005NV_0001 CGP 13:100530164-100675093
CIL_0000WK CIL_0000WK_0001 CGP 13:100603927-101416492

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037726 Tmtc4-001 protein_coding Mus_musculus 0 2915
ENSMUST00000126867 Tmtc4-005 protein_coding Mus_musculus 0 2861
ENSMUST00000148661 Tmtc4-004 protein_coding Mus_musculus 0 2854
ENSMUST00000135917 Tmtc4-002 retained_intron Mus_musculus 0 2102
ENSMUST00000143189 Tmtc4-003 nonsense_mediated_decay Mus_musculus 0 1254
ENSMUST00000126494 Tmtc4-007 processed_transcript Mus_musculus 0 1072
ENSMUST00000128969 Tmtc4-006 nonsense_mediated_decay Mus_musculus 0 403
ENSMUST00000125900 Tmtc4-008 retained_intron Mus_musculus 0 309
ENSDART00000078681 tmtc4-201 protein_coding Danio_rerio 5.60519e-45 187
ENSDART00000127214 tmtc4-001 protein_coding Danio_rerio 5.60519e-45 187

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