C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hypoxia inducible factor 3, alpha subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377670 HIF3A-003 ENSG00000124440 9606 + 19:46297046-46343433 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377670
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377670 6.417±0.00 3.565±0.00 1.807±0.00 1.861±1.75 3.766±0.00 10.506±0.00 2.849±0.00 0.457±0.00 1.525±0.00 0.433±0.34 0.856±0.95 11.163±4.07 1.300±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003713 IDA transcription coactivator activity
GO:0003714 IDA transcription corepressor activity
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007165 IEA signal transduction
GO:0046983 IEA protein dimerization activity
GO:0061418 TAS regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0071456 TAS cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108492 Hif3a-002 protein_coding Mus_musculus 0 2084
ENSMUST00000037762 Hif3a-001 protein_coding Mus_musculus 0 1965
ENSMUST00000153833 Hif3a-003 protein_coding Mus_musculus 0 457
ENSMUST00000024954 Epas1-201 protein_coding Mus_musculus 1e-18 100

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