C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium/calmodulin-dependent serine protein kinase (MAGUK family)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378168 CASK-012 ENSG00000147044 9606 - X:41519549-41561627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverOvaryENST00000378168
Transcript ID Breast Colon Kidney Liver Ovary
ENST00000378168 4.052±0.00 4.952±0.00 2.800±0.00 1.937±0.00 9.583±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LW CIL_0007LW_0001 UCNEbase X:41232520-41520330
CIL_0001X6 CIL_0001X6_0002 CGP X:41447434-41923463
CIL_0001JA CIL_0001JA_0002 CGP X:41514934-41923463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033321 Cask-002 protein_coding Mus_musculus 0 2976
ENSMUST00000115436 Cask-201 protein_coding Mus_musculus 0 2645
ENSMUST00000156096 Cask-003 protein_coding Mus_musculus 0 2645
ENSMUST00000115438 Cask-001 protein_coding Mus_musculus 0 2645
ENSMUST00000139735 Cask-008 protein_coding Mus_musculus 0 1088
ENSMUST00000115435 Cask-005 protein_coding Mus_musculus 0 1035
ENSMUST00000128095 Cask-004 protein_coding Mus_musculus 0 558
ENSMUST00000152358 Cask-010 retained_intron Mus_musculus 0 217

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