C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nyctalopin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378220 NYX-002 ENSG00000188937 9606 + X:41447460-41475652 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyOvaryPlacentaTestisENST00000378220
Transcript ID Bladder Kidney Ovary Placenta Testis
ENST00000378220 0.035±0.00 0.406±0.00 0.035±0.00 0.056±0.02 0.562±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LW CIL_0007LW_0001 UCNEbase X:41232520-41520330
CIL_0001X4 CIL_0001X4_0002 CGP X:41333348-41475710
CIL_0001X6 CIL_0001X6_0002 CGP X:41447434-41923463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005622 IDA intracellular
GO:0008150 ND biological_process
GO:0050896 IEA response to stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050434 Nyx-001 protein_coding Mus_musculus 0 1495

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