C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00066Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138050-ENSG00000183023 CGP 9606 2:39736060-40611053
GeneTranscriptPositionBiotype
ENSG00000138050 (THUMPD2)
THUMP domain containing 2 		ENST00000378727 (THUMPD2-002) 39736307-39779267 nonsense_mediated_decay
ENST00000403537 (THUMPD2-003) 39768903-39779239 processed_transcript
ENST00000460072 (THUMPD2-004) 39736060-39770013 retained_intron
ENST00000505747 (THUMPD2-001) 39736305-39779267 protein_coding
ENST00000510781 (THUMPD2-006) 39761332-39779152 nonsense_mediated_decay
ENST00000527689 (THUMPD2-008) 39761365-39766212 retained_intron
ENST00000530095 (THUMPD2-009) 39736683-39744654 retained_intron
ENST00000530522 (THUMPD2-005) 39736610-39779221 nonsense_mediated_decay
ENST00000531687 (THUMPD2-007) 39770017-39779240 processed_transcript
CIL_00066Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024246-ENSMUSG00000054640 CGP 10090 17:81026327-81649607
GeneTranscriptPositionBiotype
ENSMUSG00000024246 (Thumpd2)
THUMP domain containing 2 		ENSMUST00000025093 (Thumpd2-201) 81026327-81065085 protein_coding
ENSMUSG00000054640 (Slc8a1)
solute carrier family 8 (sodium/calcium exchanger), member 1 		ENSMUST00000086538 (Slc8a1-201) 81388691-81649607 protein_coding
ENSMUST00000163123 (Slc8a1-202) 81388691-81649607 protein_coding
ENSMUST00000163680 (Slc8a1-203) 81388691-81649607 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066Z_0001ENSG00000138050ENST00000378727ENST00000403537ENST00000460072ENST00000505747ENST00000510781ENST00000527689ENST00000530095ENST00000530522ENST00000531687CIL_00066Z_0002ENSMUSG00000024246ENSMUST00000025093ENSMUSG00000054640ENSMUST00000086538ENSMUST00000163123ENSMUST00000163680
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066Z_0001ENSG00000138050ENST00000378727ENST00000403537ENST00000460072ENST00000505747ENST00000510781ENST00000530095ENST00000530522CIL_00066Z_0002ENSMUSG00000024246ENSMUST00000025093ENSMUSG00000054640ENSMUST00000086538ENSMUST00000163123ENSMUST00000163680
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138050 ENST00000378727 0.732±0.00 0.972±0.00 N/A 0.282±0.00 0.413±0.00 1.088±0.00 0.609±0.00 1.020±0.00 0.462±0.00 0.380±0.00 0.583±0.00 2.016±0.89 0.637±0.20 0.680±0.00
ENST00000403537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.467±0.00 N/A
ENST00000460072 N/A 0.363±0.00 0.316±0.00 0.722±0.31 0.191±0.00 0.260±0.00 0.117±0.00 0.366±0.00 0.248±0.00 0.438±0.00 N/A 0.842±0.24 N/A 0.420±0.00
ENST00000505747 N/A 0.724±0.00 N/A 0.961±0.02 0.868±0.00 0.761±0.00 0.576±0.28 1.489±0.00 0.620±0.19 0.690±0.00 N/A 1.694±0.21 N/A 1.905±0.00
ENST00000510781 N/A N/A 0.281±0.00 0.531±0.00 N/A N/A 0.158±0.00 0.593±0.00 N/A N/A N/A 2.345±0.00 0.688±0.00 0.752±0.00
ENST00000527689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530095 N/A N/A N/A N/A N/A N/A N/A 1.360±0.00 N/A N/A 0.525±0.00 N/A N/A N/A
ENST00000530522 0.211±0.00 N/A 0.363±0.00 N/A N/A 0.352±0.00 N/A N/A N/A N/A 0.250±0.00 0.900±0.00 0.647±0.00 N/A
ENST00000531687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024246 ENSMUST00000025093 0.843±0.33 1.227±0.73 1.932±0.19 1.369±0.29 0.670±0.32 0.970±0.26 0.676±0.16 1.114±0.30 1.594±0.95 0.832±0.46 0.570±0.08 2.691±1.31 1.476±0.16 0.352±0.08
ENSMUSG00000054640 ENSMUST00000086538 N/A 0.009±0.00 1.277±0.00 1.315±0.00 N/A N/A 14.297±4.60 N/A 0.071±0.00 N/A 0.983±0.21 N/A N/A 0.672±0.00
ENSMUST00000163123 4.674±0.00 0.065±0.03 3.669±0.00 6.567±0.00 1.275±0.00 2.293±0.00 N/A 4.237±0.44 0.170±0.09 1.002±0.00 N/A N/A 0.409±0.12 0.611±0.07
ENSMUST00000163680 N/A 0.291±0.19 N/A N/A N/A 2.506±0.76 N/A 3.205±0.00 0.013±0.00 2.620±0.00 N/A 3.562±2.05 N/A N/A

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