C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: USP6 N-terminal like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379237 USP6NL-005 ENSG00000148429 9606 - 10:11460510-11573737 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyOvaryENST00000379237
Transcript ID Brain Colon Kidney Ovary
ENST00000379237 1.147±0.00 0.848±0.00 2.188±0.00 4.105±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EV CIL_0008EV_0001 VISTA 10:11379308-11980769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042503 Usp6nl-003 protein_coding Mus_musculus 0 2263
ENSMUST00000114937 Usp6nl-001 protein_coding Mus_musculus 0 2097
ENSMUST00000132391 Usp6nl-002 processed_transcript Mus_musculus 0 440

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