C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 5, sigma 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379573 AP5S1-003 ENSG00000125843 9606 + 20:3820531-3825302 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000379573
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000379573 1.815±0.00 3.971±0.00 1.296±0.00 1.290±0.00 2.816±0.00 3.132±0.00 2.125±0.00 0.860±0.00 2.083±0.95 4.574±1.56 1.577±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034Y CIL_00034Y_0001 CGP 20:3786772-3828837
CIL_00034V CIL_00034V_0001 CGP 20:3820524-3876123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 IEA double-strand break repair via homologous recombination
GO:0016197 IEA endosomal transport
GO:0030119 IEA AP-type membrane coat adaptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110206 Ap5s1-005 protein_coding Mus_musculus 0 593
ENSMUST00000110208 Ap5s1-003 protein_coding Mus_musculus 0 592
ENSMUST00000089506 Ap5s1-001 protein_coding Mus_musculus 0 420
ENSMUST00000110210 Ap5s1-002 protein_coding Mus_musculus 0 420
ENSMUST00000134086 Ap5s1-004 processed_transcript Mus_musculus 0 411
ENSMUST00000153097 Ap5s1-007 protein_coding Mus_musculus 0 239

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