C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107111 Elavl2-005 ENSMUSG00000008489 10090 - 4:91253240-91376434 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverLungOvaryPlacentaTestisENSMUST00000107111
Transcript ID Adipose Breast Heart Liver Lung Ovary Placenta Testis
ENSMUST00000107111 0.030±0.00 0.046±0.01 0.057±0.00 0.055±0.00 0.035±0.00 0.943±0.00 0.048±0.00 0.434±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VP CIL_0007VP_0002 VISTA 4:90727482-91328588
CIL_00074G CIL_00074G_0002 CGP 4:91250763-92147234

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223951 ELAVL2-002 protein_coding Homo_sapiens 0 1683
ENST00000380110 ELAVL2-004 protein_coding Homo_sapiens 0 1166
ENST00000380117 ELAVL2-001 protein_coding Homo_sapiens 0 2004
ENST00000397312 ELAVL2-201 protein_coding Homo_sapiens 0 1578
ENST00000423281 ELAVL2-005 protein_coding Homo_sapiens 0 719
ENST00000440102 ELAVL2-003 protein_coding Homo_sapiens 0 917
ENST00000462649 ELAVL2-006 processed_transcript Homo_sapiens 0 621
ENST00000544538 ELAVL2-202 protein_coding Homo_sapiens 0 1166

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