C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 50, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380272 FAM50B-001 ENSG00000145945 9606 + 6:3849388-3851317 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380272 2.960±0.00 4.684±0.00 0.905±0.00 7.556±3.09 3.316±2.25 4.790±3.41 3.281±1.90 3.869±2.07 2.011±0.91 1.153±0.21 5.324±2.41 5.203±4.06 2.545±0.60 8.574±5.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y7 CIL_0007Y7_0001 VISTA 6:3643401-4244038
CIL_0003IP CIL_0003IP_0001 CGP 6:3722614-3851317
CIL_0003IQ CIL_0003IQ_0001 CGP 6:3849386-4064983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039605 Fam50b-201 protein_coding Mus_musculus 0 1000

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