C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PX domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380277 PXDC1-003 ENSG00000168994 9606 - 6:3722620-3738894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380277
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380277 23.808±0.00 13.953±0.00 1.317±0.00 7.086±0.00 10.447±5.87 8.486±0.00 4.921±4.07 3.303±0.06 40.673±0.00 21.419±0.00 3.995±3.39 8.364±5.56 19.634±2.58 8.301±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IW CIL_0003IW_0001 CGP 6:3268962-3752026
CIL_0007Y7 CIL_0007Y7_0001 VISTA 6:3643401-4244038
CIL_0003IP CIL_0003IP_0001 CGP 6:3722614-3851317

Gene Ontology

GO IDEvidence TypeGO Description
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053459 Pxdc1-002 protein_coding Mus_musculus 0 470
ENSMUST00000125037 Pxdc1-003 nonsense_mediated_decay Mus_musculus 0 449
ENSMUST00000152392 Pxdc1-004 protein_coding Mus_musculus 0 364
ENSMUST00000021847 Pxdc1-001 nonsense_mediated_decay Mus_musculus 0 243

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