C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PX domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168994 PXDC1 9606 - 6:3722614-3752026 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000380277 PXDC1-003 3722620-3738894 protein_coding
  ENST00000380283 PXDC1-001 3722620-3752026 protein_coding
  ENST00000477592 PXDC1-002 3722614-3751532 processed_transcript
  ENST00000485986 PXDC1-004 3738796-3751529 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380277ENST00000380283ENST00000477592
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380277 23.808±0.00 13.953±0.00 1.317±0.00 7.086±0.00 10.447±5.87 8.486±0.00 4.921±4.07 3.303±0.06 40.673±0.00 21.419±0.00 3.995±3.39 8.364±5.56 19.634±2.58 8.301±0.00
ENST00000380283 11.779±0.00 N/A N/A 3.500±2.37 13.093±12.18 11.115±0.00 2.249±1.86 8.534±1.69 10.020±3.77 0.830±0.00 1.657±0.52 6.083±3.58 17.936±4.99 0.827±0.00
ENST00000477592 N/A 3.742±0.00 0.841±0.00 N/A 1.205±0.00 1.662±0.00 N/A 1.997±0.16 26.196±0.00 9.334±6.77 2.137±1.82 5.320±2.24 18.366±4.03 2.557±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IW CIL_0003IW_0001 CGP 6:3268962-3752026
CIL_0007Y7 CIL_0007Y7_0001 VISTA 6:3643401-4244038
CIL_0003IP CIL_0003IP_0001 CGP 6:3722614-3851317

Gene Ontology

GO IDEvidence TypeGO Description
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040309 pxdc1b PX domain containing 1b protein_coding Danio_rerio
ENSDARG00000055177 pxdc1a PX domain containing 1a protein_coding Danio_rerio
ENSMUSG00000021411 Pxdc1 PX domain containing 1 protein_coding Mus_musculus

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