C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PX domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380283 PXDC1-001 ENSG00000168994 9606 - 6:3722620-3752026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380283
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380283 11.779±0.00 3.500±2.37 13.093±12.18 11.115±0.00 2.249±1.86 8.534±1.69 10.020±3.77 0.830±0.00 1.657±0.52 6.083±3.58 17.936±4.99 0.827±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IW CIL_0003IW_0001 CGP 6:3268962-3752026
CIL_0007Y7 CIL_0007Y7_0001 VISTA 6:3643401-4244038
CIL_0003IP CIL_0003IP_0001 CGP 6:3722614-3851317

Gene Ontology

GO IDEvidence TypeGO Description
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053459 Pxdc1-002 protein_coding Mus_musculus 0 828
ENSMUST00000125037 Pxdc1-003 nonsense_mediated_decay Mus_musculus 0 808
ENSMUST00000021847 Pxdc1-001 nonsense_mediated_decay Mus_musculus 0 601
ENSMUST00000152392 Pxdc1-004 protein_coding Mus_musculus 0 366

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