C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA polymerase II associated protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380650 RPAP3-003 ENSG00000005175 9606 - 12:47663293-47705986 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLungOvaryPlacentaTestisENST00000380650
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Lung Ovary Placenta Testis
ENST00000380650 1.571±0.00 1.768±0.00 0.530±0.00 0.987±0.35 1.541±0.48 1.881±1.05 1.046±0.77 1.648±0.34 3.105±2.62 1.937±1.67 6.666±3.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YR CIL_0005YR_0001 CGP 12:47079603-47706061
CIL_0005YS CIL_0005YS_0001 CGP 12:47661249-47725567

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023104 Rpap3-201 protein_coding Mus_musculus 0 994
ENSMUST00000122295 Gm5697-001 processed_pseudogene Mus_musculus 0 922

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