C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor suppressor candidate 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382020 TUSC3-001 ENSG00000104723 9606 + 8:15540223-15766649 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382020
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382020 1.219±0.00 0.453±0.00 2.057±0.62 0.629±0.33 1.256±0.00 1.019±0.22 1.331±0.00 1.074±0.00 1.270±0.03 0.063±0.00 2.365±1.23 4.445±0.00 1.367±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006V CIL_00006V_0002 CGP 8:14089864-15766649
CIL_000456 CIL_000456_0001 CGP 8:15417215-16567490

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004579 ISS dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005739 ISS mitochondrion
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005887 NAS integral component of plasma membrane
GO:0006487 NAS protein N-linked glycosylation
GO:0008250 IDA oligosaccharyltransferase complex
GO:0015095 IMP magnesium ion transmembrane transporter activity
GO:0015693 IGI magnesium ion transport
GO:0018279 ISS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0045454 IEA cell redox homeostasis
GO:0050890 IMP cognition

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167992 Tusc3-201 protein_coding Mus_musculus 0 1725
ENSMUST00000169034 Tusc3-202 protein_coding Mus_musculus 0 532

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