C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ligand dependent nuclear receptor corepressor-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382224 LCORL-002 ENSG00000178177 9606 - 4:17880595-18020734 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryTestisENST00000382224
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000382224 0.507±0.00 1.245±0.00 0.696±0.00 0.883±0.00 1.040±0.65 0.160±0.00 0.919±0.00 1.492±0.00 0.759±0.00 0.311±0.00 0.757±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OQ CIL_0002OQ_0001 CGP 4:17810902-18021876
CIL_0002OP CIL_0002OP_0001 CGP 4:17841199-20620561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087164 Lcorl-005 protein_coding Mus_musculus 0 6276
ENSMUST00000016026 Lcorl-002 protein_coding Mus_musculus 0 6255
ENSMUST00000121573 Lcorl-004 protein_coding Mus_musculus 0 1018
ENSMUST00000045586 Lcorl-001 protein_coding Mus_musculus 0 998
ENSMUST00000190036 Lcorl-007 protein_coding Mus_musculus 0 841
ENSMUST00000187615 Lcorl-009 nonsense_mediated_decay Mus_musculus 0 553
ENSMUST00000156295 Lcorl-006 retained_intron Mus_musculus 0 497
ENSMUST00000067997 Lcorl-003 protein_coding Mus_musculus 0 497
ENSMUST00000189859 Lcorl-010 protein_coding Mus_musculus 0 468
ENSMUST00000186633 Lcorl-008 nonsense_mediated_decay Mus_musculus 0 268

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