C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ligand dependent nuclear receptor corepressor-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156295 Lcorl-006 ENSMUSG00000015882 10090 - 5:45775259-45857615 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryENSMUST00000156295
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000156295 1.512±0.43 0.634±0.11 1.919±0.82 1.422±0.00 0.889±0.00 1.264±0.09 1.715±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00032I CIL_00032I_0002 CGP 5:45529706-45700544
CIL_0002OQ CIL_0002OQ_0002 CGP 5:45669922-45857615
CIL_0002OP CIL_0002OP_0002 CGP 5:45697181-48306282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326877 LCORL-001 protein_coding Homo_sapiens 0 959
ENST00000382224 LCORL-002 protein_coding Homo_sapiens 0 497
ENST00000382226 LCORL-201 protein_coding Homo_sapiens 0 942
ENST00000510121 LCORL-003 processed_transcript Homo_sapiens 0 226
ENST00000510451 LCORL-004 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000512376 LCORL-005 processed_transcript Homo_sapiens 0 754

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