Transcript Info |
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Description: | Wolf-Hirschhorn syndrome candidate 1 | |||||
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Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000382895 | WHSC1-008 | ENSG00000109685 | 9606 | + | 4:1892845-1982207 | protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
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Region ID | Sub-Region | Region Type | Position |
CIL_0007TX | CIL_0007TX_0001 | VISTA | 4:1311752-1912379 |
CIL_0006V8 | CIL_0006V8_0001 | CGP | 4:1811479-1982207 |
CIL_0006V9 | CIL_0006V9_0001 | CGP | 4:1871424-2041903 |
Gene Ontology | ||
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GO ID | Evidence Type | GO Description |
GO:0000122 | IEA | negative regulation of transcription from RNA polymerase II promoter |
GO:0003149 | IEA | membranous septum morphogenesis |
GO:0003289 | IEA | atrial septum primum morphogenesis |
GO:0003290 | IEA | atrial septum secundum morphogenesis |
GO:0003677 | IEA | DNA binding |
GO:0003682 | IEA | chromatin binding |
GO:0005515 | IPI:IEA | protein binding |
GO:0005634 | IDA:IEA | nucleus |
GO:0005694 | IEA | chromosome |
GO:0005730 | IDA | nucleolus |
GO:0005737 | IEA | cytoplasm |
GO:0006351 | IEA | transcription, DNA-templated |
GO:0006355 | IEA | regulation of transcription, DNA-templated |
GO:0008270 | IEA | zinc ion binding |
GO:0009653 | TAS | anatomical structure morphogenesis |
GO:0010452 | IEA | histone H3-K36 methylation |
GO:0016568 | IEA | chromatin modification |
GO:0018024 | IEA | histone-lysine N-methyltransferase activity |
GO:0031965 | IDA | nuclear membrane |
GO:0034770 | IEA | histone H4-K20 methylation |
GO:0043565 | IEA | sequence-specific DNA binding |
GO:0048298 | IEA | positive regulation of isotype switching to IgA isotypes |
GO:0060348 | IEA | bone development |
GO:0070201 | IEA | regulation of establishment of protein localization |
GO:2001032 | IEA | regulation of double-strand break repair via nonhomologous end joining |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000075812 | Whsc1-001 | protein_coding | Mus_musculus | 0 | 4693 |
ENSMUST00000066854 | Whsc1-201 | protein_coding | Mus_musculus | 0 | 4689 |
ENSMUST00000058096 | Whsc1-002 | protein_coding | Mus_musculus | 0 | 4671 |
ENSMUST00000141416 | Whsc1-003 | nonsense_mediated_decay | Mus_musculus | 0 | 2625 |
ENSMUST00000137191 | Whsc1-007 | nonsense_mediated_decay | Mus_musculus | 0 | 2625 |
ENSMUST00000139845 | Whsc1-006 | nonsense_mediated_decay | Mus_musculus | 0 | 2625 |
ENSMUST00000114397 | Whsc1-004 | protein_coding | Mus_musculus | 0 | 2089 |
ENSMUST00000114399 | Whsc1-009 | protein_coding | Mus_musculus | 0 | 2082 |
ENSMUST00000155880 | Whsc1-008 | protein_coding | Mus_musculus | 0 | 791 |
ENSMUST00000142080 | Whsc1-005 | protein_coding | Mus_musculus | 0 | 448 |
ENSMUST00000133870 | Whsc1-010 | retained_intron | Mus_musculus | 0 | 353 |