C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sidekick cell adhesion molecule 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389531 SDK1-004 ENSG00000146555 9606 + 7:3301587-4266408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000389531
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000389531 1.949±0.00 1.001±0.00 0.065±0.00 1.820±0.00 1.300±0.00 0.428±0.22 0.498±0.48 0.429±0.39 0.487±0.00 0.226±0.00 0.925±0.13 1.316±0.31 1.281±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M9 CIL_0002M9_0001 CGP 7:2906141-4269000
CIL_0002MA CIL_0002MA_0001 CGP 7:3301448-4771443

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085774 Sdk1-001 protein_coding Mus_musculus 0 4879
ENSMUST00000074546 Sdk1-002 protein_coding Mus_musculus 0 4135
ENSMUST00000145908 Sdk1-003 retained_intron Mus_musculus 0 1301
ENSMUST00000129831 Sdk1-004 retained_intron Mus_musculus 0 331

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