C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392561 RBM19-002 ENSG00000122965 9606 - 12:113822054-113966310 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000392561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000392561 2.316±0.00 1.874±0.00 0.615±0.00 1.778±0.00 0.889±0.00 2.875±0.00 1.293±1.03 0.522±0.00 2.236±0.00 8.596±0.00 3.138±0.00 2.614±0.51 2.944±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000842 CIL_000842_0001 VISTA 12:113363390-113966000
CIL_000875 CIL_000875_0001 VISTA 12:113632311-114233611
CIL_0008LK CIL_0008LK_0001 VISTA 12:113632321-114234251

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0005654 ISS nucleoplasm
GO:0005694 IEA chromosome
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0016020 IDA membrane
GO:0040019 ISS positive regulation of embryonic development
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031590 Rbm19-201 protein_coding Mus_musculus 0 2320

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