C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ventricular zone expressed PH domain-containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392833 VEPH1-004 ENSG00000197415 9606 - 3:157259742-157503339 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartLiverOvaryENST00000392833
Transcript ID Bladder Breast Heart Liver Ovary
ENST00000392833 0.882±0.00 0.084±0.00 0.011±0.00 0.114±0.00 0.034±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081H CIL_00081H_0001 VISTA 3:156827989-157431369
CIL_00028W CIL_00028W_0001 CGP 3:157146508-157533619
CIL_0004JX CIL_0004JX_0002 CGP 3:157259742-157533619

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005886 IEA plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029419 Veph1-001 protein_coding Mus_musculus 0 1890
ENSMUST00000107837 Veph1-003 processed_transcript Mus_musculus 0 603

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