C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PARP1 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392911 PARPBP-006 ENSG00000185480 9606 + 12:102120247-102196429 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartOvaryPlacentaENST00000392911
Transcript ID Brain Breast Colon Heart Ovary Placenta
ENST00000392911 0.034±0.00 0.143±0.00 0.555±0.00 0.075±0.02 1.367±0.00 0.214±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:2000042 IMP negative regulation of double-strand break repair via homologous recombination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048518 Parpbp-001 protein_coding Mus_musculus 0 1096
ENSMUST00000164121 Parpbp-004 protein_coding Mus_musculus 0 420
ENSMUST00000168163 Parpbp-002 protein_coding Mus_musculus 0 403
ENSMUST00000164803 Parpbp-003 protein_coding Mus_musculus 0 346

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