C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type IV, alpha 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394872 COL4A6-201 ENSG00000197565 9606 - X:108155608-108438430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000394872
Transcript ID Liver
ENST00000394872 6.479±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JL CIL_0006JL_0001 CGP X:108091668-108439497
CIL_000172 CIL_000172_0002 CGP X:108155607-108697545

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen trimer
GO:0005587 IEA collagen type IV trimer
GO:0005604 IEA basement membrane
GO:0030198 IEA extracellular matrix organization
GO:0071230 IEA cellular response to amino acid stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101205 Col4a6-001 protein_coding Mus_musculus 0 2850

Loading