C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395416 AC005522.6-001 ENSG00000213548 9606 + 7:76361768-76362113 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyENST00000395416
Transcript ID Adrenal Brain Colon Kidney
ENST00000395416 0.096±0.00 0.051±0.00 0.045±0.00 0.096±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006E6 CIL_0006E6_0001 CGP 7:76326794-76409695

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 383
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 383
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 383
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 383
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 377
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 366
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 361
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 331
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 3.99931e-42 174
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 3e-33 145

Loading