C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cornichon family AMPA receptor auxiliary protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395573 CNIH1-002 ENSG00000100528 9606 - 14:54426936-54441391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395573
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395573 6.441±0.00 5.168±0.00 11.274±0.00 17.490±0.00 5.547±0.00 15.615±0.00 16.944±0.00 7.812±0.00 3.672±2.90 7.039±1.64 12.977±2.53 14.325±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0001 VISTA 14:53920865-54521777
CIL_00090Z CIL_00090Z_0001 VISTA 14:53923660-54524764
CIL_0000HQ CIL_0000HQ_0001 CGP 14:54396849-54441431
CIL_0000HV CIL_0000HV_0001 CGP 14:54423560-54489196

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146629 Cnih1-002 nonsense_mediated_decay Mus_musculus 0 845
ENSMUST00000015903 Cnih1-001 protein_coding Mus_musculus 0 845

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