| Transcript ID | Bladder | Brain | Lung |
|---|---|---|---|
| ENST00000395684 | 8.230±0.00 | 1.944±0.00 | 2.579±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | serine hydroxymethyltransferase 1 (soluble) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000395684  |
SHMT1-004 |
ENSG00000176974 |
9606 | - |
17:18327873-18341655  |
retained_intron |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00058O | CIL_00058O_0002 | CGP | 17:18315310-18363563 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000018744
|
Shmt1-001 | protein_coding | Mus_musculus | 0 | 952 |
|
ENSMUST00000174174
|
Shmt1-007 | nonsense_mediated_decay | Mus_musculus | 0 | 950 |
|
ENSMUST00000174093
|
Shmt1-005 | processed_transcript | Mus_musculus | 0 | 950 |
|
ENSMUST00000174214
|
Shmt1-010 | protein_coding | Mus_musculus | 0 | 739 |
|
ENSMUST00000172804
|
Shmt1-011 | retained_intron | Mus_musculus | 0 | 562 |
|
ENSMUST00000124227
|
Shmt1-003 | retained_intron | Mus_musculus | 0 | 488 |
|
ENSMUST00000174719
|
Shmt1-006 | protein_coding | Mus_musculus | 0 | 374 |
|
ENSMUST00000173260
|
Shmt1-004 | retained_intron | Mus_musculus | 0 | 372 |
