C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | serine hydroxymethyltransferase 1 (soluble) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000174719  |
Shmt1-006 |
ENSMUSG00000020534 |
10090 | - |
11:60789144-60807021  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00002B | CIL_00002B_0003 | CGP | 11:60740058-60788287 |
| CIL_00058O | CIL_00058O_0003 | CGP | 11:60777524-60811718 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000316694
|
SHMT1-001 | protein_coding | Homo_sapiens | 0 | 905 |
|
ENST00000352886
|
SHMT1-201 | protein_coding | Homo_sapiens | 0 | 577 |
|
ENST00000354098
|
SHMT1-003 | protein_coding | Homo_sapiens | 0 | 1376 |
|
ENST00000395682
|
SHMT1-005 | retained_intron | Homo_sapiens | 0 | 248 |
|
ENST00000395684
|
SHMT1-004 | retained_intron | Homo_sapiens | 0 | 374 |
|
ENST00000419974
|
SHMT1P1-001 | processed_pseudogene | Homo_sapiens | 0 | 645 |
|
ENST00000579558
|
SHMT1-008 | retained_intron | Homo_sapiens | 0 | 656 |
|
ENST00000580002
|
SHMT1-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 577 |
|
ENST00000582653
|
SHMT1-009 | protein_coding | Homo_sapiens | 0 | 520 |
