C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor corepressor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395857 NCOR1-201 ENSG00000141027 9606 - 17:16030096-16215560 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395857
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395857 4.596±0.00 2.495±0.00 2.749±0.00 2.402±0.00 4.673±0.00 1.675±0.00 2.857±0.16 3.168±0.00 3.626±0.00 3.095±0.00 2.496±0.00 1.108±0.00 4.835±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H6 CIL_0000H6_0001 CGP 17:15976560-16045015
CIL_0000NU CIL_0000NU_0001 CGP 17:15999380-16218185
CIL_0006JO CIL_0006JO_0002 CGP 17:16029157-16351797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101066 Ncor1-202 protein_coding Mus_musculus 0 8462
ENSMUST00000018645 Ncor1-001 protein_coding Mus_musculus 0 8462
ENSMUST00000155712 Ncor1-003 protein_coding Mus_musculus 0 4270
ENSMUST00000037575 Ncor1-201 protein_coding Mus_musculus 0 4257
ENSMUST00000156740 Ncor1-013 protein_coding Mus_musculus 0 4257
ENSMUST00000101067 Ncor1-004 protein_coding Mus_musculus 0 4257
ENSMUST00000101068 Ncor1-008 retained_intron Mus_musculus 0 3446
ENSMUST00000127471 Ncor1-009 protein_coding Mus_musculus 0 2416
ENSMUST00000155486 Ncor1-007 protein_coding Mus_musculus 0 1589
ENSMUST00000159069 Ncor1-002 protein_coding Mus_musculus 0 1206
ENSMUST00000151498 Ncor1-019 protein_coding Mus_musculus 0 1206
ENSMUST00000161432 Ncor1-022 retained_intron Mus_musculus 0 985
ENSMUST00000162236 Ncor1-018 protein_coding Mus_musculus 0 789
ENSMUST00000161699 Ncor1-015 protein_coding Mus_musculus 0 787
ENSMUST00000161116 Ncor1-020 protein_coding Mus_musculus 0 680
ENSMUST00000161767 Ncor1-023 retained_intron Mus_musculus 0 651
ENSMUST00000131911 Ncor1-006 retained_intron Mus_musculus 0 640
ENSMUST00000161281 Ncor1-024 retained_intron Mus_musculus 0 623
ENSMUST00000069456 Ncor1-010 protein_coding Mus_musculus 0 590
ENSMUST00000162077 Ncor1-016 retained_intron Mus_musculus 0 534
ENSMUST00000124027 Ncor1-011 retained_intron Mus_musculus 0 484
ENSMUST00000159224 Ncor1-021 protein_coding Mus_musculus 0 468
ENSMUST00000161288 Ncor1-017 protein_coding Mus_musculus 0 396
ENSMUST00000160171 Ncor1-014 retained_intron Mus_musculus 0 337
ENSMUST00000141447 Ncor1-012 protein_coding Mus_musculus 0 224
ENSMUST00000117345 Gm6743-001 processed_pseudogene Mus_musculus 1e-31 145

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