C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035285-ENSDARG00000067752 CGP 7955 5:43496834-43672652
GeneTranscriptPositionBiotype
ENSDARG00000035285 (ncor1)
nuclear receptor co-repressor 1 		ENSDART00000097574 (ncor1-201) 43496834-43615097 protein_coding
ENSDART00000143573 (ncor1-001) 43498051-43614996 protein_coding
ENSDARG00000067752 (pigl)
phosphatidylinositol glycan anchor biosynthesis, class L 		ENSDART00000097580 (pigl-001) 43615471-43672652 protein_coding
CIL_0006JO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141027-ENSG00000108474 CGP 9606 17:16029157-16351797
GeneTranscriptPositionBiotype
ENSG00000011295 (TTC19)
tetratricopeptide repeat domain 19 		ENST00000261647 (TTC19-001) 15999380-16028912 protein_coding
ENST00000465567 (TTC19-006) 16024618-16028786 retained_intron
ENST00000466729 (TTC19-012) 15999784-16004251 nonsense_mediated_decay
ENST00000470399 (TTC19-008) 15999834-16003853 nonsense_mediated_decay
ENST00000470649 (TTC19-010) 16025088-16045015 protein_coding
ENST00000475723 (TTC19-002) 15999802-16028786 nonsense_mediated_decay
ENST00000481107 (TTC19-005) 16023673-16028786 retained_intron
ENST00000497842 (TTC19-009) 15999824-16027535 processed_transcript
ENST00000578103 (TTC19-014) 16025152-16027080 protein_coding
ENST00000583704 (TTC19-015) 15999824-16000460 retained_intron
ENSG00000141027 (NCOR1)
nuclear receptor corepressor 1 		ENST00000268712 (NCOR1-001) 16029157-16215549 protein_coding
ENST00000395848 (NCOR1-007) 16091564-16194639 protein_coding
ENST00000395849 (NCOR1-018) 16032092-16080007 protein_coding
ENST00000395851 (NCOR1-003) 16031404-16194613 protein_coding
ENST00000395857 (NCOR1-201) 16030096-16215560 protein_coding
ENST00000411510 (NCOR1-009) 16126082-16215537 protein_coding
ENST00000430577 (NCOR1-012) 16171863-16218185 protein_coding
ENST00000436068 (NCOR1-006) 16086399-16091918 protein_coding
ENST00000436828 (NCOR1-002) 16126132-16215530 protein_coding
ENST00000458113 (NCOR1-022) 16046900-16080513 retained_intron
ENST00000460276 (NCOR1-008) 16126132-16215530 nonsense_mediated_decay
ENST00000464381 (NCOR1-010) 16031404-16058336 retained_intron
ENST00000466825 (NCOR1-011) 16198171-16215401 processed_transcript
ENST00000470782 (NCOR1-005) 16031404-16068412 retained_intron
ENST00000472189 (NCOR1-013) 16056974-16057935 retained_intron
ENST00000579573 (NCOR1-026) 16032473-16047035 protein_coding
ENST00000579606 (NCOR1-025) 16040445-16057730 protein_coding
ENST00000579974 (NCOR1-021) 16164906-16194611 retained_intron
ENST00000580554 (NCOR1-015) 16039517-16057723 protein_coding
ENST00000580617 (NCOR1-024) 16031988-16040108 retained_intron
ENST00000582357 (NCOR1-017) 16126107-16215529 protein_coding
ENST00000582565 (NCOR1-023) 16032433-16040659 retained_intron
ENST00000583226 (NCOR1-028) 16101718-16122635 processed_transcript
ENST00000583234 (NCOR1-014) 16046892-16049397 retained_intron
ENST00000584872 (NCOR1-027) 16061867-16065885 retained_intron
ENST00000585296 (NCOR1-020) 16164871-16215548 retained_intron
ENST00000603989 (NCOR1-029) 16039220-16039466 protein_coding
ENSG00000199674 (RNU6-862P)
RNA, U6 small nuclear 862, pseudogene 		ENST00000362804 (RNU6-862P-201) 16137768-16137872 snRNA
ENSG00000233979 (AC002553.4)
 ENST00000453217 (AC002553.4-001) 16084042-16084381 processed_pseudogene
ENSG00000239221 (RN7SL442P)
RNA, 7SL, cytoplasmic 442, pseudogene 		ENST00000473804 (RN7SL442P-201) 16191832-16192151 misc_RNA
CIL_0006JO_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018501-ENSMUSG00000014245 CGP 10090 11:62316426-62514417
GeneTranscriptPositionBiotype
ENSMUSG00000018501 (Ncor1)
nuclear receptor co-repressor 1 		ENSMUST00000018645 (Ncor1-001) 62316426-62457332 protein_coding
ENSMUST00000037575 (Ncor1-201) 62317797-62359791 protein_coding
ENSMUST00000069456 (Ncor1-010) 62401383-62457323 protein_coding
ENSMUST00000101066 (Ncor1-202) 62316426-62438515 protein_coding
ENSMUST00000101067 (Ncor1-004) 62317797-62438481 protein_coding
ENSMUST00000101068 (Ncor1-008) 62366944-62438515 retained_intron
ENSMUST00000124027 (Ncor1-011) 62395186-62401550 retained_intron
ENSMUST00000127471 (Ncor1-009) 62373386-62457806 protein_coding
ENSMUST00000131911 (Ncor1-006) 62325262-62330044 retained_intron
ENSMUST00000141447 (Ncor1-012) 62419730-62458541 protein_coding
ENSMUST00000151498 (Ncor1-019) 62344785-62392659 protein_coding
ENSMUST00000155486 (Ncor1-007) 62384757-62438515 protein_coding
ENSMUST00000155712 (Ncor1-003) 62316690-62378517 protein_coding
ENSMUST00000156740 (Ncor1-013) 62317797-62359015 protein_coding
ENSMUST00000159069 (Ncor1-002) 62344785-62392659 protein_coding
ENSMUST00000159224 (Ncor1-021) 62343021-62351390 protein_coding
ENSMUST00000159315 (Ncor1-025) 62317601-62321221 protein_coding
ENSMUST00000160171 (Ncor1-014) 62392049-62395192 retained_intron
ENSMUST00000161116 (Ncor1-020) 62353906-62369301 protein_coding
ENSMUST00000161281 (Ncor1-024) 62327131-62330943 retained_intron
ENSMUST00000161288 (Ncor1-017) 62373319-62383205 protein_coding
ENSMUST00000161432 (Ncor1-022) 62340455-62344901 retained_intron
ENSMUST00000161699 (Ncor1-015) 62373364-62384843 protein_coding
ENSMUST00000161767 (Ncor1-023) 62325512-62330168 retained_intron
ENSMUST00000162077 (Ncor1-016) 62376616-62383263 retained_intron
ENSMUST00000162236 (Ncor1-018) 62373384-62383354 protein_coding
ENSMUSG00000042298 (Ttc19)
tetratricopeptide repeat domain 19 		ENSMUST00000050646 (Ttc19-003) 62281484-62316426 protein_coding
ENSMUST00000101075 (Ttc19-004) 62281482-62315246 protein_coding
ENSMUST00000136477 (Ttc19-001) 62281473-62282588 processed_transcript
ENSMUST00000154976 (Ttc19-002) 62309042-62328451 processed_transcript
ENSMUST00000162385 (Ttc19-005) 62283674-62328123 protein_coding
ENSMUSG00000081944 (Gm12276)
predicted gene 12276 		ENSMUST00000121709 (Gm12276-001) 62331421-62331721 processed_pseudogene
ENSMUSG00000086310 (Gm12278)
predicted gene 12278 		ENSMUST00000153718 (Gm12278-001) 62482797-62501704 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JO_0001ENSDARG00000035285ENSDART00000097574ENSDART00000143573ENSDARG00000067752ENSDART00000097580CIL_0006JO_0002ENSG00000011295ENST00000261647ENST00000465567ENST00000466729ENST00000470399ENST00000470649ENST00000475723ENST00000481107ENST00000497842ENST00000578103ENST00000583704ENSG00000141027ENST00000268712ENST00000395848ENST00000395849ENST00000395851ENST00000395857ENST00000411510ENST00000430577ENST00000436068ENST00000436828ENST00000458113ENST00000460276ENST00000464381ENST00000466825ENST00000470782ENST00000472189ENST00000579573ENST00000579606ENST00000579974ENST00000580554ENST00000580617ENST00000582357ENST00000582565ENST00000583226ENST00000583234ENST00000584872ENST00000585296ENST00000603989ENSG00000199674ENST00000362804ENSG00000233979ENST00000453217ENSG00000239221ENST00000473804CIL_0006JO_0003ENSMUSG00000018501ENSMUST00000018645ENSMUST00000037575ENSMUST00000069456ENSMUST00000101066ENSMUST00000101067ENSMUST00000101068ENSMUST00000124027ENSMUST00000127471ENSMUST00000131911ENSMUST00000141447ENSMUST00000151498ENSMUST00000155486ENSMUST00000155712ENSMUST00000156740ENSMUST00000159069ENSMUST00000159224ENSMUST00000159315ENSMUST00000160171ENSMUST00000161116ENSMUST00000161281ENSMUST00000161288ENSMUST00000161432ENSMUST00000161699ENSMUST00000161767ENSMUST00000162077ENSMUST00000162236ENSMUSG00000042298ENSMUST00000050646ENSMUST00000101075ENSMUST00000136477ENSMUST00000154976ENSMUST00000162385ENSMUSG00000081944ENSMUST00000121709ENSMUSG00000086310ENSMUST00000153718
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JO_0001ENSDARG00000035285ENSDART00000097574ENSDART00000143573ENSDARG00000067752ENSDART00000097580CIL_0006JO_0002ENSG00000011295ENST00000261647ENST00000465567ENST00000475723ENST00000481107ENST00000497842ENSG00000141027ENST00000268712ENST00000395848ENST00000395849ENST00000395851ENST00000395857ENST00000411510ENST00000464381ENST00000582357ENSG00000199674ENST00000362804ENSG00000233979ENST00000453217ENSG00000239221ENST00000473804CIL_0006JO_0003ENSMUSG00000018501ENSMUST00000018645ENSMUST00000037575ENSMUST00000101066ENSMUST00000101067ENSMUST00000127471ENSMUST00000151498ENSMUST00000155486ENSMUST00000155712ENSMUST00000156740ENSMUST00000159069ENSMUST00000161699ENSMUSG00000042298ENSMUST00000050646ENSMUST00000136477ENSMUSG00000081944ENSMUST00000121709ENSMUSG00000086310ENSMUST00000153718
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035285 ENSDART00000097574 N/A N/A N/A 4.850±3.08 N/A N/A 5.223±1.63 6.790±3.91 1.462±0.00 N/A N/A N/A N/A N/A
ENSDART00000143573 N/A N/A N/A N/A N/A N/A N/A N/A 0.676±0.00 N/A N/A N/A N/A N/A
ENSDARG00000067752 ENSDART00000097580 N/A N/A N/A 3.238±1.14 N/A N/A 4.008±2.47 4.767±1.71 0.201±0.00 N/A 1.205±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000011295 ENST00000261647 4.889±0.00 6.455±0.00 3.757±0.00 11.718±0.62 5.143±3.15 4.247±0.00 2.847±1.26 6.079±1.83 3.019±0.23 2.743±0.09 1.604±0.00 5.448±0.83 6.335±1.75 7.321±0.00
ENST00000465567 N/A 2.925±0.00 3.951±0.00 N/A N/A 5.335±0.00 0.955±0.00 2.720±0.00 2.916±0.00 2.540±0.00 N/A 3.943±1.08 N/A N/A
ENST00000466729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475723 7.450±0.00 5.041±0.00 4.049±0.00 21.395±0.00 9.643±0.00 3.369±0.00 7.300±0.00 17.934±0.00 4.053±0.00 5.032±1.78 7.165±0.00 6.280±1.34 9.720±3.67 7.115±0.00
ENST00000481107 N/A 3.229±0.00 N/A 9.593±0.00 3.594±0.00 6.493±0.00 2.084±0.00 6.653±0.00 2.125±0.47 2.890±1.09 1.792±0.00 4.543±2.40 N/A 12.792±0.00
ENST00000497842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.841±0.00 N/A
ENST00000578103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141027 ENST00000268712 N/A 4.651±0.00 2.455±0.00 1.984±0.40 2.028±0.00 6.990±0.00 1.732±0.00 4.098±0.00 3.311±1.76 4.825±0.00 N/A 3.539±1.59 1.132±0.00 N/A
ENST00000395848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.780±0.00 N/A
ENST00000395849 N/A N/A N/A 5.218±0.00 N/A N/A 5.184±0.00 8.495±0.00 N/A 7.273±0.00 8.288±0.64 12.161±3.79 5.738±0.44 11.581±0.00
ENST00000395851 8.100±0.00 7.982±0.00 2.465±0.00 3.875±1.82 4.214±0.77 6.784±1.48 2.802±1.71 6.744±0.00 4.555±0.00 2.944±0.00 4.566±2.92 10.175±4.39 5.817±2.59 12.131±2.91
ENST00000395857 4.596±0.00 N/A 2.495±0.00 2.749±0.00 2.402±0.00 4.673±0.00 1.675±0.00 2.857±0.16 3.168±0.00 3.626±0.00 3.095±0.00 2.496±0.00 1.108±0.00 4.835±0.00
ENST00000411510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.206±0.00 N/A
ENST00000430577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464381 N/A N/A N/A N/A N/A N/A N/A N/A 7.086±0.00 N/A N/A 9.870±0.00 N/A N/A
ENST00000466825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.477±0.00 N/A 30.382±0.00
ENST00000582565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199674 ENST00000362804 0.213±0.00 0.668±0.00 N/A N/A N/A 0.418±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233979 ENST00000453217 0.077±0.00 N/A N/A N/A 1.860±0.00 N/A N/A N/A 0.399±0.00 N/A N/A 0.745±0.51 N/A N/A
ENSG00000239221 ENST00000473804 N/A 0.193±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018501 ENSMUST00000018645 5.549±0.09 6.892±1.25 N/A N/A 8.959±0.00 6.351±1.19 3.355±0.65 4.466±0.16 3.717±0.80 6.769±2.28 3.665±0.00 10.845±0.55 N/A 5.273±0.94
ENSMUST00000037575 N/A N/A N/A 18.060±0.00 N/A N/A N/A N/A 9.425±3.54 N/A N/A N/A 10.937±5.55 N/A
ENSMUST00000069456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000101066 N/A 7.969±0.00 6.462±0.00 7.974±2.01 6.857±0.00 N/A N/A N/A 3.380±0.00 N/A 4.814±0.39 12.690±2.98 5.892±2.21 N/A
ENSMUST00000101067 N/A N/A N/A 12.795±0.00 N/A N/A N/A N/A N/A N/A N/A 16.516±0.00 9.262±0.09 5.323±0.00
ENSMUST00000101068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127471 N/A 20.509±1.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.799±0.00
ENSMUST00000155486 N/A N/A N/A 42.722±0.00 N/A N/A N/A N/A N/A N/A N/A 39.708±0.00 29.501±2.58 22.341±0.00
ENSMUST00000155712 8.520±1.81 N/A 11.460±1.14 17.267±0.64 7.661±1.03 N/A 3.875±0.56 7.412±1.06 7.312±2.58 5.619±0.08 8.982±0.85 12.238±6.89 9.583±4.23 N/A
ENSMUST00000156740 13.923±1.87 18.226±3.27 10.588±1.24 15.212±0.00 17.769±3.13 15.015±2.88 7.118±1.71 10.830±1.72 8.090±2.33 13.264±5.46 N/A 19.711±6.50 N/A 11.301±3.31
ENSMUST00000159069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.057±0.00
ENSMUST00000159224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 89.230±0.00 N/A 50.215±0.00
ENSMUST00000161767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042298 ENSMUST00000050646 N/A N/A 14.564±0.34 21.263±3.48 N/A N/A 9.779±0.88 N/A 8.822±1.72 N/A 11.329±0.82 N/A 8.374±0.42 N/A
ENSMUST00000101075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.824±0.00 N/A N/A
ENSMUST00000154976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081944 ENSMUST00000121709 4.998±1.74 3.494±0.96 10.038±0.72 9.579±2.83 9.277±5.15 4.731±2.08 3.575±1.22 5.313±2.07 4.255±1.76 6.510±1.72 1.876±0.51 10.505±3.54 7.346±2.94 1.544±0.63
ENSMUSG00000086310 ENSMUST00000153718 N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A 0.187±0.00 N/A N/A N/A 0.043±0.00 N/A

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