C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongator acetyltransferase complex subunit 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395934 ELP4-003 ENSG00000109911 9606 + 11:31509778-31783775 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000395934
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000395934 0.649±0.00 1.882±0.00 0.979±0.00 0.649±0.00 1.064±0.00 0.849±0.00 0.483±0.00 0.345±0.00 0.521±0.00 0.733±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JA CIL_0007JA_0001 UCNEbase 11:30717111-31639896
CIL_00096G CIL_00096G_0001 VISTA 11:31180488-31781610
CIL_0008KI CIL_0008KI_0001 VISTA 11:31301275-31902571
CIL_0007UQ CIL_0007UQ_0001 VISTA 11:31363809-31965336
CIL_0008UP CIL_0008UP_0001 VISTA 11:31463875-32065678
CIL_0007XG CIL_0007XG_0001 VISTA 11:31494904-32096873

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0033588 IEA Elongator holoenzyme complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122965 Elp4-001 protein_coding Mus_musculus 0 1077
ENSMUST00000028588 Elp4-003 protein_coding Mus_musculus 0 754
ENSMUST00000152272 Elp4-004 retained_intron Mus_musculus 0 540
ENSMUST00000148441 Elp4-002 processed_transcript Mus_musculus 2e-33 148

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