C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane BAX inhibitor motif containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396809 TMBIM1-201 ENSG00000135926 9606 - 2:218274201-218285934 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000396809
Transcript ID Testis
ENST00000396809 2.890±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VJ CIL_0005VJ_0001 CGP 2:218264123-218346793
CIL_0005VI CIL_0005VI_0001 CGP 2:218270392-218346793
CIL_0005VH CIL_0005VH_0001 CGP 2:218274192-218368099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005123 IDA death receptor binding
GO:0005765 IDA lysosomal membrane
GO:0005794 IDA Golgi apparatus
GO:0010008 IDA endosome membrane
GO:0016021 IEA integral component of membrane
GO:0048553 ISS negative regulation of metalloenzyme activity
GO:0070062 IDA extracellular vesicular exosome
GO:0090005 IMP negative regulation of establishment of protein localization to plasma membrane
GO:1902042 IMP negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:1902045 IMP negative regulation of Fas signaling pathway
GO:2000504 ISS positive regulation of blood vessel remodeling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113796 Tmbim1-002 protein_coding Mus_musculus 0 1046
ENSMUST00000016309 Tmbim1-001 protein_coding Mus_musculus 0 1046
ENSMUST00000135384 Tmbim1-003 retained_intron Mus_musculus 0 560
ENSMUST00000152603 Tmbim1-004 retained_intron Mus_musculus 0 529
ENSMUST00000128505 Tmbim1-008 protein_coding Mus_musculus 0 252

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