C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane BAX inhibitor motif containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152603 Tmbim1-004 ENSMUSG00000006301 10090 - 1:74288251-74295695 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryENSMUST00000152603
Transcript ID Bladder Brain Liver Ovary
ENSMUST00000152603 6.661±0.32 0.402±0.13 0.960±0.00 3.431±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0002 VISTA 1:73730234-74332407
CIL_0005VJ CIL_0005VJ_0002 CGP 1:74279840-74353694
CIL_0005VI CIL_0005VI_0002 CGP 1:74284930-74353694
CIL_0005VH CIL_0005VH_0002 CGP 1:74288247-74369321

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258412 TMBIM1-001 protein_coding Homo_sapiens 0 529
ENST00000396809 TMBIM1-201 protein_coding Homo_sapiens 0 529
ENST00000418569 TMBIM1-016 protein_coding Homo_sapiens 0 440
ENST00000425694 TMBIM1-020 protein_coding Homo_sapiens 0 440
ENST00000429501 TMBIM1-015 protein_coding Homo_sapiens 0 440
ENST00000437694 TMBIM1-004 nonsense_mediated_decay Homo_sapiens 0 529
ENST00000439306 TMBIM1-023 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000444881 TMBIM1-003 protein_coding Homo_sapiens 0 529
ENST00000445635 TMBIM1-002 protein_coding Homo_sapiens 0 529
ENST00000465082 TMBIM1-006 retained_intron Homo_sapiens 0 529
ENST00000466012 TMBIM1-008 retained_intron Homo_sapiens 0 209
ENST00000476429 TMBIM1-021 retained_intron Homo_sapiens 1e-28 130
ENST00000492966 TMBIM1-022 retained_intron Homo_sapiens 1.00053e-42 176
ENST00000495113 TMBIM1-014 retained_intron Homo_sapiens 0 440

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