C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane BAX inhibitor motif containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016309 Tmbim1-001 ENSMUSG00000006301 10090 - 1:74288247-74304405 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016309
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016309 33.966±9.74 28.119±1.15 23.829±11.88 1.259±0.45 32.999±8.05 52.300±17.08 18.332±3.41 11.868±0.41 9.995±4.15 67.333±2.50 19.521±2.16 22.824±5.59 17.385±7.65 1.255±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0002 VISTA 1:73730234-74332407
CIL_0005VJ CIL_0005VJ_0002 CGP 1:74279840-74353694
CIL_0005VI CIL_0005VI_0002 CGP 1:74284930-74353694
CIL_0005VH CIL_0005VH_0002 CGP 1:74288247-74369321

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258412 TMBIM1-001 protein_coding Homo_sapiens 0 1064
ENST00000396809 TMBIM1-201 protein_coding Homo_sapiens 0 1046
ENST00000418569 TMBIM1-016 protein_coding Homo_sapiens 0 488
ENST00000425694 TMBIM1-020 protein_coding Homo_sapiens 0 560
ENST00000429501 TMBIM1-015 protein_coding Homo_sapiens 0 562
ENST00000437694 TMBIM1-004 nonsense_mediated_decay Homo_sapiens 0 652
ENST00000439306 TMBIM1-023 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000444881 TMBIM1-003 protein_coding Homo_sapiens 0 1046
ENST00000445635 TMBIM1-002 protein_coding Homo_sapiens 0 813
ENST00000465082 TMBIM1-006 retained_intron Homo_sapiens 0 813
ENST00000466012 TMBIM1-008 retained_intron Homo_sapiens 0 294
ENST00000476429 TMBIM1-021 retained_intron Homo_sapiens 0 215
ENST00000492966 TMBIM1-022 retained_intron Homo_sapiens 0 294
ENST00000495113 TMBIM1-014 retained_intron Homo_sapiens 0 542

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