C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caspase recruitment domain family, member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396946 CARD11-011 ENSG00000198286 9606 - 7:2906141-3043945 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396946
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396946 0.139±0.00 11.159±0.00 0.146±0.00 0.197±0.00 0.510±0.00 0.114±0.00 0.044±0.00 0.394±0.00 0.188±0.02 2.470±2.19 0.154±0.00 4.573±5.44 0.416±0.18 0.211±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RS CIL_0007RS_0001 VISTA 7:2311652-2915186
CIL_0002MC CIL_0002MC_0001 CGP 7:2728112-3043945
CIL_0002M9 CIL_0002M9_0001 CGP 7:2906141-4269000

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001772 IEA immunological synapse
GO:0001819 IMP positive regulation of cytokine production
GO:0004385 NAS guanylate kinase activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0007165 IEA signal transduction
GO:0030890 IEA positive regulation of B cell proliferation
GO:0031295 IDA T cell costimulation
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0042101 IDA T cell receptor complex
GO:0042102 IEA positive regulation of T cell proliferation
GO:0042981 IEA regulation of apoptotic process
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045061 IEA thymic T cell selection
GO:0045086 IEA positive regulation of interleukin-2 biosynthetic process
GO:0045087 TAS innate immune response
GO:0045121 IDA membrane raft
GO:0045577 IEA regulation of B cell differentiation
GO:0045580 IEA regulation of T cell differentiation
GO:0046939 NAS nucleotide phosphorylation
GO:0050700 IPI CARD domain binding
GO:0050776 IEA regulation of immune response
GO:0050852 TAS T cell receptor signaling pathway
GO:0050870 IEA positive regulation of T cell activation
GO:0051092 IMP positive regulation of NF-kappaB transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085786 Card11-201 protein_coding Mus_musculus 0 3917

Loading