C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: junctophilin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133954 Jph4-002 ENSMUSG00000022208 10090 - 14:55111490-55116580 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverOvaryPlacentaENSMUST00000133954
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Ovary Placenta
ENSMUST00000133954 0.050±0.01 8.612±0.27 0.065±0.02 0.634±0.00 0.019±0.00 0.033±0.01 0.011±0.01 0.300±0.01 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0002 VISTA 14:54638004-55241428
CIL_0009BW CIL_0009BW_0002 VISTA 14:54696106-55297707
CIL_0008Q4 CIL_0008Q4_0002 VISTA 14:54696894-55297224
CIL_0008QH CIL_0008QH_0002 VISTA 14:54703667-55304830
CIL_0003BV CIL_0003BV_0002 CGP 14:55098578-55116935
CIL_0001QP CIL_0001QP_0002 CGP 14:55106830-55241435

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356300 JPH4-001 protein_coding Homo_sapiens 0 2303
ENST00000397118 JPH4-002 protein_coding Homo_sapiens 0 1764
ENST00000553505 JPH4-005 retained_intron Homo_sapiens 0 2193
ENST00000622501 JPH4-201 protein_coding Homo_sapiens 0 1507

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